What is ‘QINDAO’?
Introduction
QINDAO (Quantitative INDex of Alpha diversity Overview) is a tool that provides various diversities based on not only the number of taxonomy (e.g. species) but also the gene functions (orthologue and pathway) in a metagenomic analysis. With this tool, you can calculate and visualize the various features of the microbiota. for details
How to start
When a user uploads amplicon sequence results obtained by QIIME2 (reads of amplicon sequence variant, representative sequences, and taxonomy) or HUMAnN3 (taxonomic and kegg orthology abundance), the user can calculate and visualize various diversity indices. for detailsWorkflow of full pipeline
